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  1. uc-cdis/label-boosted-RAG-for-RRG uc-cdis/label-boosted-RAG-for-RRG Public

    LaB-RAG (Label Boosted Retrieval Augmented Generation): a generalizable framework for captioning using categorical labels as image descriptors.

    Python 13 2

  2. uc-cdis/gdc-cohort-copilot uc-cdis/gdc-cohort-copilot Public

    GDC Cohort Copilot is an AI copilot tool to assist in the curation of cohorts from the NCI GDC using natural language.

    Python 4

  3. multimodal-cancer-modeling multimodal-cancer-modeling Public

    Multimodal Cancer Modeling in the Age of Foundation Model Embeddings

    Jupyter Notebook 5

  4. czbiohub-chi/immune-llm-acl czbiohub-chi/immune-llm-acl Public

    Virtual CRISPR Code and benchmark datasets for predicting CRISPR screen results with LLMs, as described in "Virtual CRISPR: Can LLMs Predict CRISPR Screen Results?" for the BioNLP workshop at ACL 2025

    Jupyter Notebook 4 1