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Hard to swap between hierarchical and standard because of sigma

hierarchicalRelated to hierarchical optimizationRelated to hierarchical optimization

optimizationRelated to optimization processRelated to optimization process

PEtab

Status: Open.

#1653 In ICB-DCM/pyPESTO;

· Doresic opened on Dec 4, 2025

Profiles do not show if dropoff due to bound hitting

enhancementNew feature or requestNew feature or request

profilingRelated to profilingRelated to profiling

visualizationRelated to any visualizationRelated to any visualization

Status: Open.

#1651 In ICB-DCM/pyPESTO;

· Doresic opened on Dec 2, 2025

Unified Interface: Absolute Tolerance

enhancementNew feature or requestNew feature or request

optimizationRelated to optimization processRelated to optimization process

Status: Open.

#1646 In ICB-DCM/pyPESTO;

· PaulJonasJost opened on Nov 28, 2025

Sacess usage example or simplification of usage

documentation

optimizationRelated to optimization processRelated to optimization process

Status: Open.

#1641 In ICB-DCM/pyPESTO;

· Doresic opened on Nov 20, 2025

Inconsistent types in get_prediction_dataset

Status: Open.

#1625 In ICB-DCM/pyPESTO;

· devoncallan opened on Oct 16, 2025

Renaming in profiling

profilingRelated to profilingRelated to profiling

questionFurther information is requestedFurther information is requested

Status: Open.

#1624 In ICB-DCM/pyPESTO;

· plakrisenko opened on Oct 15, 2025

FAILED test/base/test_roadrunner.py::test_petab_case[0018-sbml-v1.0.0]

CI

PEtab

Status: Open.

#1597 In ICB-DCM/pyPESTO;

· dweindl opened on Aug 20, 2025

Fix test/petab/test_petabSimulator.py::test_petab_case[0020-sbml-v1.0.0]

bugSomething isn't workingSomething isn't working

PEtab

Status: Open.

#1583 In ICB-DCM/pyPESTO;

· dweindl opened on Jun 24, 2025

Select: use termination flag from PEtab Select to end model selection

bugSomething isn't workingSomething isn't working

Status: Open.

#1576 In ICB-DCM/pyPESTO;

· dilpath opened on May 13, 2025

Sampling fails due to degenerate covariance matrix in parameter proposal step.

bugSomething isn't workingSomething isn't working

Status: Open.

#1575 In ICB-DCM/pyPESTO;

· vwiela opened on May 13, 2025

Using parameter_profile with a specific start point

profilingRelated to profilingRelated to profiling

Status: Open.

#1565 In ICB-DCM/pyPESTO;

· sumiya11 opened on Apr 2, 2025

Update example/petab_import.ipynb

documentation

PEtab

Status: Open.

#1562 In ICB-DCM/pyPESTO;

· dweindl opened on Mar 28, 2025