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Pull requests: BayraktarLab/cell2location

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Pull requests list

Fix #424, AttributeError: 'Series' object has no attribute 'nonzero'
#425 opened Oct 23, 2025 by huxs001 Loading…
1
Update Dockerfile
#420 opened Sep 24, 2025 by vitkl Loading…
High resolution model & distance function prior [draft]
#337 opened Nov 26, 2023 by vitkl Loading…
1
[pre-commit.ci] pre-commit autoupdate
#333 opened Nov 13, 2023 by pre-commit-ci bot Loading…
Independent residual factor model
#179 opened Jul 12, 2022 by vitkl Loading…
Option to train the model with residual non-negative factors
#178 opened Jul 11, 2022 by vitkl Loading…
Location-specific sampling of cell type signatures and background
#175 opened Jul 6, 2022 by vitkl Loading…
Cell-type specific amortising NN & necessary changes to AutoGuide
#159 opened May 18, 2022 by vitkl Loading…
Exclusion of observed variables from posterior
#144 opened Apr 16, 2022 by vitkl Loading…
13
Posterior quantile detects minibatch plate vars
#135 opened Mar 23, 2022 by vitkl Loading…
1
Option to treat y_s as detection probability
#118 opened Jan 30, 2022 by vitkl Loading…
Changing AutoNormal -> AutoNormalMessenger enhancement New feature or request
#114 opened Jan 25, 2022 by vitkl Loading…
Support for multiplicative effects for arbitrary covariates in the spatial data discussion
#96 opened Nov 16, 2021 by vitkl Loading…
Cell2location model that considers cell type hierarchy when mapping replaced/inactive WIP
#83 opened Oct 26, 2021 by vitkl Loading…
1
Continuous gene expression model (Gamma) discussion
#76 opened Oct 7, 2021 by vitkl Loading…
ProTip! Updated in the last three days: updated:>2025-12-27.