diff --git a/docs/source/_static/SBML_Antimony_Editors.pdf b/docs/source/_static/SBML_Antimony_Editors.pdf deleted file mode 100644 index 2cdd50f..0000000 Binary files a/docs/source/_static/SBML_Antimony_Editors.pdf and /dev/null differ diff --git a/docs/source/_static/SBML_Antimony_Editors.png b/docs/source/_static/SBML_Antimony_Editors.png new file mode 100644 index 0000000..bfe5fd5 Binary files /dev/null and b/docs/source/_static/SBML_Antimony_Editors.png differ diff --git a/docs/source/_static/Table_View_PlotView.pdf b/docs/source/_static/Table_View_PlotView.pdf deleted file mode 100644 index da686eb..0000000 Binary files a/docs/source/_static/Table_View_PlotView.pdf and /dev/null differ diff --git a/docs/source/_static/Table_View_PlotView.png b/docs/source/_static/Table_View_PlotView.png new file mode 100644 index 0000000..7537088 Binary files /dev/null and b/docs/source/_static/Table_View_PlotView.png differ diff --git a/docs/source/_static/Table_View_withInfo.pdf b/docs/source/_static/Table_View_withInfo.pdf deleted file mode 100644 index d5831b9..0000000 Binary files a/docs/source/_static/Table_View_withInfo.pdf and /dev/null differ diff --git a/docs/source/_static/Table_View_withInfo.png b/docs/source/_static/Table_View_withInfo.png new file mode 100644 index 0000000..10c9090 Binary files /dev/null and b/docs/source/_static/Table_View_withInfo.png differ diff --git a/docs/source/tutorial.rst b/docs/source/tutorial.rst index 2c625bd..2e3b0f0 100644 --- a/docs/source/tutorial.rst +++ b/docs/source/tutorial.rst @@ -60,7 +60,7 @@ The Main Window When you first launch **PEtab-GUI**, you'll see the main window as shown below: -.. figure:: _static/Table_View_withInfo.pdf +.. figure:: _static/Table_View_withInfo.png :alt: PEtab-GUI Main Window :width: 100% :align: center @@ -109,7 +109,7 @@ The interface is organized into several key areas: Changes in these can be forwarded to the other editor, allowing you to work in your preferred format. → See: :ref:`sbml-editor` - .. figure:: _static/SBML_Antimony_Editors.pdf + .. figure:: _static/SBML_Antimony_Editors.png :alt: SBML and Antimony Editors :width: 100% :align: center @@ -242,7 +242,7 @@ Validation and Inspection Once you have filled out all the tables, it is important to validate your PEtab problem to avoid errors during parameter estimation. PEtab-GUI supports this through **Visualization and Simulation** and **Linting** features: - .. figure:: _static/Table_View_PlotView.pdf + .. figure:: _static/Table_View_PlotView.png :alt: SBML and Antimony Editors :width: 100% :align: center