diff --git a/conda-dubii-3-stat-R.yml b/conda-dubii-3-stat-R.yml index 325902f..5938ddd 100644 --- a/conda-dubii-3-stat-R.yml +++ b/conda-dubii-3-stat-R.yml @@ -4,27 +4,27 @@ name: dubii_r_2019 channels: - - r - conda-forge + - bioconda/label/gcc7 # To get R > 3.5 - bioconda + - default - lcantini dependencies: ## RCRAN packages - - r::r-base >=3.5,< 3.6 - - r::r-knitr # For R markdown - - r::r-kableextra # To export nice-looking tables in the R markdown reports - - r::r-formattable # nice formating of tables in reports - - r::r-roxygen2 # To build package documentation - - r::r-yaml # Required to load Yaml config files - - r::r-e1071 # for SVM - - r::r-randomforest # Supervised classification - - r::r-tidyverse # Collection of R packages designed for data science (ggplot2, tidyr, dplyr, readr, purr, tibble, strigr, forcats) - - r::r-FactoMineR # For PCA - - r::r-factoextra # To plot PCA output - - r::r-cowplot # Add-on to ggplot2 for enhance design - - r::r-corrplot # Graphical display of a correlation matrix, confidence interval + - conda-forge::r-knitr # For R markdown + - conda-forge::r-kableextra # To export nice-looking tables in the R markdown reports + - conda-forge::r-formattable # nice formating of tables in reports + - conda-forge::r-roxygen2 # To build package documentation + - conda-forge::r-yaml # Required to load Yaml config files + - conda-forge::r-e1071 # for SVM + - conda-forge::r-randomforest # Supervised classification + - conda-forge::r-tidyverse # Collection of R packages designed for data science (ggplot2, tidyr, dplyr, readr, purr, tibble, strigr, forcats) + - bioconda::r-factominer # For PCA + - conda-forge::r-factoextra # To plot PCA output + - conda-forge::r-cowplot # Add-on to ggplot2 for enhance design + - conda-forge::r-corrplot # Graphical display of a correlation matrix, confidence interval ## Bioconductor packages - bioconda::bioconductor-deseq2